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| School | District | Grades | Population | Address - click for map | Phone |
| Atlantic Elementary School | Nassau County School District | 2-3 | 391 | 1205 Atlantic Ave, Fernandina Beach, FL 32034 | (904) 491–7930 |
| Emma Love Hardee Elementary | Nassau County School District | K-9 | 395 | 2200 Susan Dr, Fernandina Beach, FL 32034 | (904) 491–7936 |
| Fernandina Beach High School | Nassau County School District | 9-12 | 1740 | 435 Citrona Dr, Fernandina Beach, FL 32034 | (904) 491–7937 |
| Fernandina Beach Middle School | Nassau County School District | 6-8 | 691 | 315 Citrona Dr, Fernandina Beach, FL 32034 | (904) 491–7938 |
| Nassau County Superintendent's Office | Nassau County School District | N/A | 0 | 1201 Atlantic Ave, Fernandina Beach, FL 32034 | (904) 491–9901 |
| Nassau Halfway House | Nassau County School District | 7-11 | 21 | 1781 Lisa Ave, Fernandina Beach, FL 32034 | (904) 277–4244 |
| Southside Elementary School | Nassau County School District | PK | 416 | 1112 Jasmine St, Fernandina Beach, FL 32034 | (904) 491–7941 |
| Faith Christian Academy | Private | PK | 181 | 134 Brady Point Road, Fernandina Beach, FL 32034 | (904) 321–2137 |